Published data collections

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cell type (253)
condition (39)
development stage (4)
organism (8)
platform (45)
protein profile (2)
repertoire profile (3)
technology (5)
tissue (42)
treatment (2)
B cell
Bergmann glial cell
CD16-negative, CD56-bright natural killer cell, human
CD16-positive, CD56-dim natural killer cell, human
CD4-positive helper T cell
CD4-positive, alpha-beta T cell
CD4-positive, alpha-beta cytotoxic T cell
CD4-positive, alpha-beta memory T cell
CD8-positive, alpha-beta T cell
CD8-positive, alpha-beta memory T cell
GABAergic amacrine cell
GABAergic interneuron
GABAergic neuron
Hofbauer cell
IgA plasma cell
IgG plasma cell
IgM plasma cell
Kupffer cell
Langerhans cell
M cell of gut
Merkel cell
Mueller cell
OFF-bipolar cell
ON-bipolar cell
Purkinje cell
Schwann cell
T cell
T follicular helper cell
T-helper 1 cell
T-helper 17 cell
T-helper 2 cell
abnormal cell
acinar cell
acinar cell of salivary gland
adipocyte
adventitial cell
alveolar macrophage
amacrine cell
astrocyte
basal cell
basophil
brush cell
capillary endothelial cell
cardiac muscle cell
cardiac valve cell
central memory CD4-positive, alpha-beta T cell
central memory CD8-positive, alpha-beta T cell
chandelier cell
cholangiocyte
chondrocyte
ciliated cell
classical monocyte
club cell
colon epithelial cell
common lymphoid progenitor
common myeloid progenitor
cone retinal bipolar cell
connective tissue cell
conventional dendritic cell
cortical thymic epithelial
dendritic cell
deuterosomal cell
differentiation-committed oligodendrocyte precursor
dopaminergic neuron
double negative thymocyte
double-positive, alpha-beta thymocyte
duct epithelial cell
early lymphoid progenitor
effector CD4-positive, alpha-beta T cell
effector CD8-positive, alpha-beta T cell
effector memory CD4-positive, alpha-beta T cell
effector memory CD4-positive, alpha-beta T cell, terminally differentiated
effector memory CD8-positive, alpha-beta T cell
effector memory CD8-positive, alpha-beta T cell, terminally differentiated
embryonic cell
endocardial cell
endocrine cell
endothelial cell
endothelial cell of artery
endothelial cell of lymphatic vessel
endothelial cell of sinusoid
endothelial cell of vascular tree
enteric neuron
enterochromaffin-like cell
enterocyte
enteroendocrine cell
eosinophil
ependymal cell
epithelial cell
epithelial cell of proximal tubule
epithelial cell of thymus
erythroblast
erythrocyte
erythroid lineage cell
exhausted T cell
exocrine cell
extraembryonic cell
extravillous trophoblast
fibroblast
follicular B cell
follicular dendritic cell
foveolar cell of stomach
gamma-delta T cell
germinal center B cell
glandular epithelial cell
glial cell
glomerular endothelial cell
glutamatergic neuron
glycinergic amacrine cell
goblet cell
granule cell
granulocyte
granulocyte monocyte progenitor cell
granulosa cell
group 1 innate lymphoid cell
group 2 innate lymphoid cell
group 3 innate lymphoid cell
hematopoietic precursor cell
hematopoietic stem cell
hepatic stellate cell
hepatocyte
hillock cell
immature B cell
inflammatory macrophage
inhibitory interneuron
innate lymphoid cell
intermediate monocyte
interneuron
interstitial cell of Cajal
intestinal crypt stem cell
intraepithelial lymphocyte
ionocyte
keratinocyte
kidney connecting tubule epithelial cell
kidney distal convoluted tubule epithelial cell
kidney epithelial cell
kidney loop of Henle epithelial cell
leptomeningeal cell
luminal adaptive secretory precursor cell of mammary gland
luminal cell of prostate epithelium
luminal epithelial cell of mammary gland
luminal hormone-sensing cell of mammary gland
lymphocyte
macrophage
male germ cell
mast cell
mature NK T cell
medium spiny neuron
medullary thymic epithelial cell
megakaryocyte
megakaryocyte-erythroid progenitor cell
melanocyte
memory B cell
mesangial cell
mesenchymal stem cell
mesothelial cell
microglial cell
monocyte
mononuclear phagocyte
motor neuron
mucosal invariant T cell
mucus secreting cell
mural cell
muscle cell
myeloid cell
myoblast
myoepithelial cell
myofibroblast cell
naive B cell
naive thymus-derived CD4-positive, alpha-beta T cell
naive thymus-derived CD8-positive, alpha-beta T cell
natural killer cell
neural crest cell
neural progenitor cell
neuroblast (sensu Vertebrata)
neuroendocrine cell
neuron
neutrophil
neutrophil progenitor cell
non-classical monocyte
odontoblast
oligodendrocyte
oligodendrocyte precursor cell
oocyte
osteoblast
osteoclast
ovarian surface epithelial cell
pancreatic A cell
pancreatic D cell
pancreatic PP cell
pancreatic ductal cell
pancreatic epsilon cell
pancreatic stellate cell
paneth cell
papillary tips cell
parietal epithelial cell
peptic cell
pericyte
photoreceptor cell
pituitary gland cell
placental villous trophoblast
plasma cell
plasmablast
plasmacytoid dendritic cell
platelet
pluripotent stem cell
pneumocyte
podocyte
pre-conventional dendritic cell
precursor B cell
precursor cell
pro-B cell
pro-T cell
progenitor cell
progenitor cell of mammary luminal epithelium
promonocyte
radial glial cell
regulatory T cell
renal alpha-intercalated cell
renal beta-intercalated cell
renal intercalated cell
renal principal cell
respiratory goblet cell
respiratory suprabasal cell
retina horizontal cell
retinal bipolar neuron
retinal cone cell
retinal ganglion cell
retinal pigment epithelial cell
retinal rod cell
rod bipolar cell
secretory cell
serous secreting cell
smooth muscle cell
spermatid
spermatocyte
squamous epithelial cell
stratified epithelial cell
syncytiotrophoblast cell
taste receptor cell of tongue
theca cell
thymocyte
tissue-resident macrophage
tongue muscle cell
transit amplifying cell
type B pancreatic cell
type I pneumocyte
type II pneumocyte
umbrella cell of urothelium
unipolar brush cell
urothelial cell
vein endothelial cell
vestibular dark cell
173 studies
Studies1,264 datasets
301,272,946 cells
Title
Total cells
1

Astrocyte regional specialization is shaped by postnatal development

https://doi.org/10.1101/2024.10.11.617802Jun 01, 2025# 1,479,500 cells
Detail
2

Tahoe-100M: A Giga-Scale Single-Cell Perturbation Atlas for Context-Dependent Gene Function and Cellular Modeling

https://doi.org/10.1101/2025.02.20.639398May 10, 2025# 91,985,264 cells
Detail
3

Futile wound healing drives mesenchymal-like cell phenotypes in human glioblastoma

https://doi.org/10.1101/2023.09.01.555882Apr 02, 2025# 258,718 cells
Detail
4

Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics

https://doi.org/10.7554/eLife.104815.1Mar 11, 2025# 948,487 cells
Detail
5

4D marmoset brain map reveals MRI and molecular signatures for onset of multiple sclerosis–like lesions

https://doi.org/10.1126/science.adp6325Feb 28, 2025# 1,245,961 cells
Detail
6

Transcriptional profile of the rat cardiovascular system at single-cell resolution

https://doi.org/10.1016/j.celrep.2024.115091Jan 28, 2025# 504,278 cells
Detail
7

Human subcutaneous and visceral adipocyte atlases uncover classical and nonclassical adipocytes and depot-specific patterns

https://doi.org/10.1038/s41588-024-02048-3Jan 24, 2025# 283,672 cells
Detail
8

Exploring the utility of snRNA-seq in profiling human bladder tissue: A comprehensive comparison with scRNA-seq

https://doi.org/10.1016/j.isci.2024.111628Dec 18, 2024# 59,665 cells
Detail
9

Cross-species single-cell RNA-seq analysis reveals disparate and conserved cardiac and extracardiac inflammatory responses upon heart injury

https://doi.org/10.1038/s42003-024-07315-xDec 03, 2024# 265,098 cells
Detail
10

The Immunoregulatory Architecture of the Adult Oral Cavity

https://doi.org/10.1101/2024.12.01.626279Dec 02, 2024# 552,677 cells
Detail
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